Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 HK2P1-201ENST00000447818 2737 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 AC243591.1-201ENST00000452967 1364 ntBASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 LINC01568-207ENST00000641790 1380 ntBASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 OS9-203ENST00000389142 2457 ntTSL 5 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
LINC01558Q9Y6Z2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AL512791.2-201ENST00000615251 4609 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ARMC10P1-201ENST00000313754 855 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ESRRAP1-201ENST00000400596 1257 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 GHSR-202ENST00000427970 912 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AC009947.2-201ENST00000444014 672 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 OR2A1-AS1-207ENST00000486094 819 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AL365330.1-201ENST00000607459 531 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AC131009.4-201ENST00000624048 1740 ntBASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms