Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 AC104457.1-201ENST00000401024 814 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 GHSR-202ENST00000427970 912 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 GAPDHP40-201ENST00000505218 1006 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 BRI3BPP1-201ENST00000594224 787 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 TMEM261P1-201ENST00000604899 340 ntBASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC4Q9Y296 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AC027612.1-201ENST00000445234 2395 ntBASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AC026410.3-201ENST00000514280 936 ntBASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 AC093813.1-201ENST00000605066 256 ntBASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC4Q9Y296 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
TRAPPC4Q9Y296 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.19
TRAPPC4Q9Y296 DRD5P1-201ENST00000456605 1438 ntBASIC13.9□□□□□ -0.19
TRAPPC4Q9Y296 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.9□□□□□ -0.19
TRAPPC4Q9Y296 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 AC126755.1-201ENST00000525846 6405 ntBASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC4Q9Y296 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms