Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CHMP4BP1-201ENST00000556017 588 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CU633904.3-201ENST00000624042 1029 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 AL157791.1-201ENST00000553667 1699 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 PAUPAR-201ENST00000630360 2965 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.14■□□□□ 0.34
SYNPO2Q9UMS6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SYNPO2Q9UMS6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 RBM8B-201ENST00000555532 525 ntBASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPO2Q9UMS6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 RN7SL769P-201ENST00000469386 295 ntBASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 NAP1L6-202ENST00000641404 1222 ntBASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 AC126177.1-201ENST00000547829 2218 ntBASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms