Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC104457.1-201ENST00000401024 814 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 KRT43P-201ENST00000434019 910 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 MTX1P1-201ENST00000440904 838 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 KRT18P25-201ENST00000508931 1278 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC026748.1-201ENST00000624349 3251 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 AC117489.1-201ENST00000625169 3217 ntBASIC14.42□□□□□ -0.1
CCDC88CQ9P219 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 MIR326-201ENST00000362220 95 ntBASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 FAM8A2P-201ENST00000528813 1142 ntBASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 RPL13AP20-201ENST00000459725 609 ntBASIC14.41□□□□□ -0.1
CCDC88CQ9P219 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 AP000812.2-201ENST00000538934 718 ntBASIC14.41□□□□□ -0.1
CCDC88CQ9P219 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC88CQ9P219 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms