Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 PRKXP1-201ENST00000561423 1122 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AC103988.2-201ENST00000561804 725 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 SPCS2P2-201ENST00000603270 608 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 TMBIM7P-203ENST00000641617 1718 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 ZBED1P1-201ENST00000502364 1930 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 REXO1L2P-201ENST00000425429 2069 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 PDIA3P2-201ENST00000428073 158 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AC078875.1-201ENST00000431907 724 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AL157407.1-201ENST00000435784 904 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AC131206.1-201ENST00000538078 1211 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 AC006453.1-201ENST00000636037 1257 ntBASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC10Q9NYD6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AC239868.1-201ENST00000369385 493 ntBASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 MIR33B-201ENST00000385104 96 ntBASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 RTN3P1-201ENST00000536295 711 ntBASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AC012044.1-201ENST00000603431 297 ntBASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC10Q9NYD6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms