Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC027601.3-201ENST00000622907 509 ntBASIC13.65□□□□□ -0.22
CHD8Q9HCK8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHD8Q9HCK8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
CHD8Q9HCK8 PCDH8P1-201ENST00000428983 2773 ntBASIC13.65□□□□□ -0.23
CHD8Q9HCK8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
CHD8Q9HCK8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.23
CHD8Q9HCK8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.65□□□□□ -0.23
CHD8Q9HCK8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AC073869.2-201ENST00000417338 1026 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 RN7SL665P-201ENST00000578793 300 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AC112220.4-201ENST00000604982 1263 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 GGNBP1-204ENST00000613113 887 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SPTLC1P3-201ENST00000403408 259 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AC008026.2-201ENST00000495438 348 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 KRT18P37-201ENST00000520711 1282 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.64□□□□□ -0.23
CHD8Q9HCK8 PRAL-201ENST00000624952 3286 ntBASIC13.64□□□□□ -0.23
CHD8Q9HCK8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 IFNWP2-201ENST00000431203 580 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 RN7SL33P-201ENST00000462543 342 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC008494.1-201ENST00000497612 796 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms