Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 AC211429.1-201ENST00000415277 523 ntBASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 CYP4F24P-201ENST00000586049 1580 ntBASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SMIM3Q9BZL3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AP002414.3-201ENST00000589352 1468 ntBASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AC098859.1-201ENST00000502915 1238 ntBASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CLEC4GP1-201ENST00000596555 870 ntBASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM3Q9BZL3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SMIM3Q9BZL3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM3Q9BZL3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM3Q9BZL3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM3Q9BZL3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM3Q9BZL3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms