Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DFFBP1-201ENST00000433250 979 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 WASH4P-201ENST00000564273 1246 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 AL132655.2-201ENST00000596276 594 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 PKD1P5-201ENST00000532415 10291 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AC011474.4-201ENST00000623523 2076 ntBASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 INGX-202ENST00000489074 768 ntBASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 GIMAP3P-201ENST00000495150 836 ntBASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 RN7SL204P-201ENST00000582831 262 ntBASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AL138725.1-201ENST00000407347 1314 ntBASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO3Q9BXY4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AC089987.1-201ENST00000551654 2209 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ACTBP8-201ENST00000403258 1108 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 TSPY16P-201ENST00000449843 468 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AC093433.1-201ENST00000458048 571 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 WFDC1-204ENST00000613603 549 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms