Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC113367.3-201ENST00000508316 1912 ntBASIC20.91■□□□□ 0.94
CCDC7Q96M83 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 AL354702.1-201ENST00000442006 1960 ntBASIC20.9■□□□□ 0.94
CCDC7Q96M83 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.9■□□□□ 0.94
CCDC7Q96M83 AL513477.1-201ENST00000602865 2407 ntBASIC20.9■□□□□ 0.94
CCDC7Q96M83 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC7Q96M83 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC7Q96M83 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
CCDC7Q96M83 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC7Q96M83 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC7Q96M83 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC7Q96M83 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC7Q96M83 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC7Q96M83 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CCDC7Q96M83 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 AC138696.2-201ENST00000607376 223 ntBASIC20.89■□□□□ 0.93
CCDC7Q96M83 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC7Q96M83 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC7Q96M83 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 MIR326-201ENST00000362220 95 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AC092506.1-202ENST00000401022 528 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AL590640.2-201ENST00000457038 527 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AL391280.1-201ENST00000506969 1062 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AC023310.1-201ENST00000554836 735 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 RHOQP1-201ENST00000555758 579 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 RN7SL48P-201ENST00000579283 293 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AL118558.3-201ENST00000607414 1079 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 ENPP7P14-201ENST00000621765 1040 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms