Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 PDPK2P-202ENST00000562415 1191 ntBASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 AC106730.1-201ENST00000566722 1090 ntBASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC002056.1-201ENST00000395613 760 ntBASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC023274.1-201ENST00000418278 595 ntBASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC112191.1-201ENST00000523689 701 ntBASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 INE2-201ENST00000630399 1874 ntBASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP6Q96FZ7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 AL139010.1-201ENST00000454878 894 ntBASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 FAM197Y3-203ENST00000618346 717 ntBASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 AC092865.6-201ENST00000642101 219 ntBASIC15.27■□□□□ 0.04
CHMP6Q96FZ7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms