Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
AP3S1Q92572 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.36□□□□□ -0.27
AP3S1Q92572 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 AC104457.1-201ENST00000401024 814 ntBASIC13.36□□□□□ -0.27
AP3S1Q92572 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.36□□□□□ -0.27
AP3S1Q92572 AC007064.4-201ENST00000637740 555 ntBASIC13.36□□□□□ -0.27
AP3S1Q92572 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP3S1Q92572 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S1Q92572 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP3S1Q92572 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.36□□□□□ -0.27
AP3S1Q92572 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S1Q92572 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S1Q92572 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 AC018665.1-201ENST00000622927 1362 ntBASIC13.35□□□□□ -0.27
AP3S1Q92572 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 TSPY19P-201ENST00000418461 509 ntBASIC13.35□□□□□ -0.27
AP3S1Q92572 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 TSPY18P-201ENST00000441642 509 ntBASIC13.35□□□□□ -0.27
AP3S1Q92572 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.35□□□□□ -0.27
AP3S1Q92572 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.35□□□□□ -0.27
AP3S1Q92572 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.35□□□□□ -0.27
AP3S1Q92572 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.35□□□□□ -0.27
AP3S1Q92572 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S1Q92572 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S1Q92572 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S1Q92572 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
AP3S1Q92572 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AP3S1Q92572 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.34□□□□□ -0.27
AP3S1Q92572 AZGP1P1-201ENST00000411909 902 ntBASIC13.34□□□□□ -0.27
AP3S1Q92572 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms