Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 ADH5P3-201ENST00000433842 1137 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SPDYE11-202ENST00000450699 704 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC243562.1-201ENST00000560672 389 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC106730.1-201ENST00000566722 1090 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SPDYE9P-201ENST00000570642 692 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SPDYE10P-202ENST00000612005 668 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SPDYE8P-202ENST00000612377 668 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 BX640515.1-201ENST00000617215 977 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC092902.6-201ENST00000641783 218 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIPK4Q8NE63 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 SPCS2P4-201ENST00000436160 681 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 IGHV3-62-201ENST00000520057 340 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 SLC25A1P1-201ENST00000528351 927 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 KRT8P23-201ENST00000560090 1207 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AC026120.1-201ENST00000611536 926 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 AC018442.1-201ENST00000421439 2061 ntBASIC14.77□□□□□ -0.05
HIPK4Q8NE63 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIPK4Q8NE63 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIPK4Q8NE63 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms