Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 CICP23-201ENST00000605013 2741 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 DOC2GP-202ENST00000514950 1163 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC023310.3-201ENST00000557027 670 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC100756.1-201ENST00000562736 682 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC138749.3-201ENST00000567691 622 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC036164.1-201ENST00000570544 333 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AC116165.1-201ENST00000611806 668 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 C8orf49-201ENST00000525043 1968 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 FGD5P1-202ENST00000614866 2498 ntBASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF439Q8NDP4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZNF439Q8NDP4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.58□□□□□ -0.39
ZNF439Q8NDP4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZNF439Q8NDP4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZNF439Q8NDP4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 FAM86LP-201ENST00000478302 853 ntBASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms