Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SIX5Q8N196 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 ISCA2P1-201ENST00000425548 448 ntBASIC15.5■□□□□ 0.07
SIX5Q8N196 PDIA3P2-201ENST00000428073 158 ntBASIC15.5■□□□□ 0.07
SIX5Q8N196 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC090164.2-201ENST00000611487 516 ntBASIC15.5■□□□□ 0.07
SIX5Q8N196 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AL805961.1-201ENST00000642026 753 ntBASIC15.5■□□□□ 0.07
SIX5Q8N196 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIX5Q8N196 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIX5Q8N196 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.49■□□□□ 0.07
SIX5Q8N196 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.49■□□□□ 0.07
SIX5Q8N196 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 AC100827.2-201ENST00000563214 1194 ntBASIC15.49■□□□□ 0.07
SIX5Q8N196 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 AC138466.3-201ENST00000619983 221 ntBASIC15.49■□□□□ 0.07
SIX5Q8N196 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SIX5Q8N196 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.49■□□□□ 0.07
SIX5Q8N196 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX5Q8N196 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
SIX5Q8N196 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIX5Q8N196 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIX5Q8N196 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX5Q8N196 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 DBET-201ENST00000630918 3363 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.48■□□□□ 0.07
SIX5Q8N196 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 RPSAP31-201ENST00000416648 895 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 RPL13AP19-201ENST00000434320 584 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 PUDPP3-201ENST00000445368 636 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.48■□□□□ 0.07
SIX5Q8N196 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms