Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 SCARNA20.5-201ENST00000516991 142 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AC044849.1-201ENST00000519737 1188 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AL021578.1-201ENST00000613646 709 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AC244452.3-201ENST00000636814 210 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AP000593.2-201ENST00000542775 1433 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 RN7SKP175-201ENST00000408472 289 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 NKAIN1P1-201ENST00000435754 582 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC126915.1-201ENST00000522847 1038 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC020914.3-201ENST00000594712 304 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AL358472.3-201ENST00000608147 415 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AC068587.10-201ENST00000641210 219 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 MIR600HG-201ENST00000449175 5984 ntBASIC16.79■□□□□ 0.28
TRIM50Q86XT4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM50Q86XT4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 AL354877.1-201ENST00000424412 413 ntBASIC16.78■□□□□ 0.28
TRIM50Q86XT4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 BX284668.4-201ENST00000453917 508 ntBASIC16.78■□□□□ 0.28
TRIM50Q86XT4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 AC138696.2-201ENST00000607376 223 ntBASIC16.78■□□□□ 0.28
TRIM50Q86XT4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms