Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 LINC02199-201ENST00000506655 2702 ntBASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 KRT18P36-201ENST00000411618 1276 ntBASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AL807761.2-201ENST00000422849 729 ntBASIC16■□□□□ 0.15
CNKSR3Q6P9H4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 RPL18AP3-201ENST00000462885 528 ntBASIC16■□□□□ 0.15
CNKSR3Q6P9H4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 MIR4522-201ENST00000584932 87 ntBASIC16■□□□□ 0.15
CNKSR3Q6P9H4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AHCYP4-201ENST00000419201 1315 ntBASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AC097065.1-201ENST00000425737 517 ntBASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AP000845.1-201ENST00000581677 2131 ntBASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 AC092850.2-201ENST00000623821 2697 ntBASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNKSR3Q6P9H4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AC007292.2-201ENST00000593524 1812 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms