Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 KRT8P35-201ENST00000483942 1338 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AL158070.2-201ENST00000623713 1621 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AL139094.1-201ENST00000405549 1188 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 KLF2P2-201ENST00000416807 1039 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 AC012183.1-201ENST00000625197 499 ntBASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC39BQ5VTQ0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TTC39BQ5VTQ0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 WASH3P-207ENST00000560956 1394 ntBASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 RNU1-114P-201ENST00000365297 166 ntBASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 AC079776.1-201ENST00000401540 1152 ntBASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 ACA64.2-201ENST00000459014 129 ntBASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 KRT8P14-201ENST00000414254 1442 ntBASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms