Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AC011840.2-201ENST00000563063 1520 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC138028.6-201ENST00000616106 1482 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC009093.2-202ENST00000620513 2079 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 SCARNA20.5-201ENST00000516991 142 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC016629.1-201ENST00000596579 586 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AL451050.2-201ENST00000606967 682 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AL358472.3-201ENST00000608147 415 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC108673.2-201ENST00000608909 565 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 AL157762.1-201ENST00000619612 415 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC020910.5-201ENST00000623668 1865 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC015967.2-201ENST00000624092 234 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC006435.4-201ENST00000625037 234 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AL356737.1-201ENST00000634391 234 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 AC002472.3-201ENST00000640124 621 ntBASIC15.98■□□□□ 0.15
VARS2Q5ST30 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VARS2Q5ST30 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VARS2Q5ST30 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 FNTAP2-201ENST00000430308 634 ntBASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AL353718.1-201ENST00000451028 517 ntBASIC15.97■□□□□ 0.15
VARS2Q5ST30 MPRIPP1-201ENST00000452433 1089 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms