Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 AC006486.2-201ENST00000624246 2199 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.55■□□□□ 0.4
GABPAQ06546 VDAC1P1-201ENST00000439229 848 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 AC005740.2-201ENST00000511085 419 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 AC013355.1-201ENST00000562625 723 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 RN7SL163P-201ENST00000583100 276 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.55■□□□□ 0.4
GABPAQ06546 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.55■□□□□ 0.4
GABPAQ06546 Z98259.2-201ENST00000641583 609 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 AC073347.1-201ENST00000421633 2643 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.55■□□□□ 0.4
GABPAQ06546 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.55■□□□□ 0.4
GABPAQ06546 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABPAQ06546 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
GABPAQ06546 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 CYP46A4P-201ENST00000414953 267 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 SLC25A24P2-201ENST00000415059 510 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 FAM58BP-201ENST00000439056 645 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 SPTLC1P5-201ENST00000450718 252 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 RPL18P13-201ENST00000478088 569 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.54■□□□□ 0.4
GABPAQ06546 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GABPAQ06546 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
GABPAQ06546 AL021578.1-201ENST00000613646 709 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 AP000346.4-201ENST00000614827 381 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.54■□□□□ 0.4
GABPAQ06546 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.54■□□□□ 0.4
GABPAQ06546 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GABPAQ06546 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
GABPAQ06546 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.54■□□□□ 0.4
GABPAQ06546 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GABPAQ06546 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GABPAQ06546 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.54■□□□□ 0.4
GABPAQ06546 AC013726.1-201ENST00000563747 2285 ntBASIC17.54■□□□□ 0.4
GABPAQ06546 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABPAQ06546 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 LINC01101-201ENST00000622953 1884 ntBASIC17.53■□□□□ 0.4
GABPAQ06546 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.53■□□□□ 0.4
GABPAQ06546 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GABPAQ06546 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.53■□□□□ 0.4
GABPAQ06546 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.53■□□□□ 0.4
GABPAQ06546 CICP12-201ENST00000455801 843 ntBASIC17.53■□□□□ 0.4
GABPAQ06546 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABPAQ06546 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.53■□□□□ 0.4
GABPAQ06546 HLA-J-204ENST00000495278 958 ntBASIC17.53■□□□□ 0.4
GABPAQ06546 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
GABPAQ06546 MARK2P5-201ENST00000507649 634 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms