Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AP3S2-216ENST00000617003 1561 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AC023141.5-201ENST00000458585 616 ntBASIC14.38□□□□□ -0.11
CHRNB3Q05901 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 IGHV3-62-201ENST00000520057 340 ntBASIC14.38□□□□□ -0.11
CHRNB3Q05901 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AL645728.2-202ENST00000641679 227 ntBASIC14.38□□□□□ -0.11
CHRNB3Q05901 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 AL137784.3-201ENST00000623858 2288 ntBASIC14.38□□□□□ -0.11
CHRNB3Q05901 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRNB3Q05901 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 AC055811.4-201ENST00000624039 1754 ntBASIC14.37□□□□□ -0.11
CHRNB3Q05901 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 AL592309.1-201ENST00000443127 649 ntBASIC14.37□□□□□ -0.11
CHRNB3Q05901 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRNB3Q05901 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRNB3Q05901 RFPL4AP1-201ENST00000530883 850 ntBASIC14.37□□□□□ -0.11
CHRNB3Q05901 KRT8P23-201ENST00000560090 1207 ntBASIC14.37□□□□□ -0.11
CHRNB3Q05901 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms