Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 CICP20-201ENST00000443330 2801 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 AL442647.2-201ENST00000429864 857 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 FAM207CP-201ENST00000443486 507 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 GNAQP1-201ENST00000444815 1067 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.91□□□□□ -0.02
CDKL1Q00532 UGT1A2P-201ENST00000454886 866 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 AC104596.2-201ENST00000512793 793 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.91□□□□□ -0.02
CDKL1Q00532 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.91□□□□□ -0.02
CDKL1Q00532 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 AC027796.2-201ENST00000575326 344 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 AC093726.1-201ENST00000608064 963 ntBASIC14.91□□□□□ -0.02
CDKL1Q00532 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.91□□□□□ -0.02
CDKL1Q00532 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL1Q00532 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKL1Q00532 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL1Q00532 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKL1Q00532 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 INTS4P2-202ENST00000614726 2019 ntBASIC14.9□□□□□ -0.02
CDKL1Q00532 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL1Q00532 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDKL1Q00532 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL1Q00532 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDKL1Q00532 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CDKL1Q00532 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKL1Q00532 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKL1Q00532 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDKL1Q00532 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL1Q00532 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms