Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
EFNB1P98172 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.46□□□□□ -0.25
EFNB1P98172 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.46□□□□□ -0.25
EFNB1P98172 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
EFNB1P98172 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.46□□□□□ -0.25
EFNB1P98172 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.46□□□□□ -0.25
EFNB1P98172 NUS1P3-201ENST00000423502 862 ntBASIC13.46□□□□□ -0.25
EFNB1P98172 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNB1P98172 AC107373.2-201ENST00000607735 490 ntBASIC13.46□□□□□ -0.25
EFNB1P98172 AL596442.2-201ENST00000610240 980 ntBASIC13.46□□□□□ -0.25
EFNB1P98172 AL662799.1-202ENST00000614205 422 ntBASIC13.46□□□□□ -0.25
EFNB1P98172 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.46□□□□□ -0.25
EFNB1P98172 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNB1P98172 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
EFNB1P98172 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.46□□□□□ -0.26
EFNB1P98172 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EFNB1P98172 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
EFNB1P98172 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 AL022342.1-201ENST00000400363 863 ntBASIC13.45□□□□□ -0.26
EFNB1P98172 AC254562.1-201ENST00000417586 456 ntBASIC13.45□□□□□ -0.26
EFNB1P98172 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.45□□□□□ -0.26
EFNB1P98172 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.45□□□□□ -0.26
EFNB1P98172 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 AC109322.1-201ENST00000524499 1264 ntBASIC13.45□□□□□ -0.26
EFNB1P98172 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNB1P98172 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNB1P98172 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNB1P98172 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms