Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AC107890.1-201ENST00000422478 521 ntBASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 ZNF890P-202ENST00000530367 1156 ntBASIC12.71□□□□□ -0.37
HLA-DRB3P79483 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AC140878.1-201ENST00000565277 250 ntBASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB3P79483 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB3P79483 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AL360270.3-201ENST00000609118 1348 ntBASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.7□□□□□ -0.38
HLA-DRB3P79483 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC067863.1-201ENST00000494933 530 ntBASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC025678.2-201ENST00000562061 970 ntBASIC12.7□□□□□ -0.38
HLA-DRB3P79483 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB3P79483 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms