Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS1BP61024 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CKS1BP61024 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS1BP61024 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS1BP61024 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.71□□□□□ -0.69
CKS1BP61024 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS1BP61024 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.71□□□□□ -0.69
CKS1BP61024 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS1BP61024 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 MIR4321-201ENST00000592276 80 ntBASIC10.71□□□□□ -0.69
CKS1BP61024 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS1BP61024 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS1BP61024 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS1BP61024 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS1BP61024 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CKS1BP61024 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.71□□□□□ -0.7
CKS1BP61024 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
CKS1BP61024 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC10.71□□□□□ -0.7
CKS1BP61024 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
CKS1BP61024 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
CKS1BP61024 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
CKS1BP61024 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS1BP61024 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.71□□□□□ -0.7
CKS1BP61024 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
CKS1BP61024 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.7□□□□□ -0.7
CKS1BP61024 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 AP002414.3-201ENST00000589352 1468 ntBASIC10.7□□□□□ -0.7
CKS1BP61024 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 AKR1C7P-201ENST00000305623 895 ntBASIC10.7□□□□□ -0.7
CKS1BP61024 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CKS1BP61024 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 FAM197Y8-203ENST00000450145 560 ntBASIC10.7□□□□□ -0.7
CKS1BP61024 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.7□□□□□ -0.7
CKS1BP61024 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 AC092127.1-201ENST00000567093 3455 ntBASIC10.7□□□□□ -0.7
CKS1BP61024 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms