Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VSX2P58304 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 FAM197Y7-201ENST00000432892 766 ntBASIC14.5□□□□□ -0.09
VSX2P58304 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 KRT223P-202ENST00000449164 1292 ntBASIC14.5□□□□□ -0.09
VSX2P58304 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 AC119751.2-201ENST00000504529 210 ntBASIC14.5□□□□□ -0.09
VSX2P58304 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 MIR4259-201ENST00000584466 101 ntBASIC14.5□□□□□ -0.09
VSX2P58304 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.5□□□□□ -0.09
VSX2P58304 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 COX11-210ENST00000639671 696 ntBASIC14.5□□□□□ -0.09
VSX2P58304 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 MROH4P-201ENST00000431302 1578 ntBASIC14.5□□□□□ -0.09
VSX2P58304 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 AL137783.1-201ENST00000623494 1896 ntBASIC14.5□□□□□ -0.09
VSX2P58304 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.5□□□□□ -0.09
VSX2P58304 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 AC091951.1-201ENST00000512854 2465 ntBASIC14.5□□□□□ -0.09
VSX2P58304 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.5□□□□□ -0.09
VSX2P58304 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VSX2P58304 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VSX2P58304 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.49□□□□□ -0.09
VSX2P58304 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 WASH3P-207ENST00000560956 1394 ntBASIC14.49□□□□□ -0.09
VSX2P58304 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.49□□□□□ -0.09
VSX2P58304 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 AL590640.2-201ENST00000457038 527 ntBASIC14.49□□□□□ -0.09
VSX2P58304 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.49□□□□□ -0.09
VSX2P58304 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms