Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
WNT3P56703 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3P56703 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3P56703 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3P56703 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3P56703 AL928921.2-201ENST00000641325 2442 ntBASIC14.29□□□□□ -0.12
WNT3P56703 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3P56703 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 GK-202ENST00000378941 458 ntTSL 3 BASIC14.28□□□□□ -0.12
WNT3P56703 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 DFFBP1-201ENST00000433250 979 ntBASIC14.28□□□□□ -0.12
WNT3P56703 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3P56703 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3P56703 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
WNT3P56703 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.28□□□□□ -0.12
WNT3P56703 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.28□□□□□ -0.12
WNT3P56703 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3P56703 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 AL358472.5-202ENST00000641448 1267 ntBASIC14.28□□□□□ -0.12
WNT3P56703 AC068587.6-202ENST00000641839 5619 ntBASIC14.28□□□□□ -0.12
WNT3P56703 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
WNT3P56703 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3P56703 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3P56703 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
WNT3P56703 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
WNT3P56703 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3P56703 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3P56703 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.27□□□□□ -0.12
WNT3P56703 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
WNT3P56703 AL139094.1-201ENST00000405549 1188 ntBASIC14.27□□□□□ -0.13
WNT3P56703 NUS1P3-201ENST00000423502 862 ntBASIC14.27□□□□□ -0.13
WNT3P56703 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3P56703 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 AC244107.1-201ENST00000442033 332 ntBASIC14.27□□□□□ -0.13
WNT3P56703 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3P56703 AC022447.6-201ENST00000515522 438 ntBASIC14.27□□□□□ -0.13
WNT3P56703 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
WNT3P56703 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.27□□□□□ -0.13
WNT3P56703 RRP7BP-205ENST00000566851 833 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms