Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH13P55290 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH13P55290 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH13P55290 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH13P55290 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH13P55290 AC023511.2-201ENST00000618803 211 ntBASIC14.83□□□□□ -0.04
CDH13P55290 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 KRT18P28-201ENST00000453838 1332 ntBASIC14.83□□□□□ -0.04
CDH13P55290 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDH13P55290 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH13P55290 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH13P55290 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH13P55290 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 DRD5P1-201ENST00000456605 1438 ntBASIC14.83□□□□□ -0.04
CDH13P55290 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH13P55290 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CDH13P55290 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 AL158070.2-201ENST00000623713 1621 ntBASIC14.82□□□□□ -0.04
CDH13P55290 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.82□□□□□ -0.04
CDH13P55290 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH13P55290 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH13P55290 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 METTL21AP1-201ENST00000438852 635 ntBASIC14.82□□□□□ -0.04
CDH13P55290 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH13P55290 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH13P55290 GRK6P1-201ENST00000400595 1711 ntBASIC14.82□□□□□ -0.04
CDH13P55290 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH13P55290 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH13P55290 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH13P55290 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 AC023090.2-201ENST00000625182 2110 ntBASIC14.81□□□□□ -0.04
CDH13P55290 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms