Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.18■□□□□ 0.66
BRPF1P55201 AC106872.11-201ENST00000605838 421 ntBASIC19.18■□□□□ 0.66
BRPF1P55201 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 AC232323.1-201ENST00000540724 2099 ntBASIC19.18■□□□□ 0.66
BRPF1P55201 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.17■□□□□ 0.66
BRPF1P55201 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.17■□□□□ 0.66
BRPF1P55201 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.17■□□□□ 0.66
BRPF1P55201 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.17■□□□□ 0.66
BRPF1P55201 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRPF1P55201 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.17■□□□□ 0.66
BRPF1P55201 AC007969.1-201ENST00000433675 447 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 CSF2RBP1-201ENST00000447905 391 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 FTH1P14-201ENST00000482930 551 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 RNA5SP486-201ENST00000515961 83 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.17■□□□□ 0.66
BRPF1P55201 AP003171.2-201ENST00000528208 925 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 AP000812.2-201ENST00000538934 718 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.17■□□□□ 0.66
BRPF1P55201 BX088702.1-201ENST00000610784 235 ntBASIC19.17■□□□□ 0.66
BRPF1P55201 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.17■□□□□ 0.66
BRPF1P55201 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BRPF1P55201 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
BRPF1P55201 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BRPF1P55201 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRPF1P55201 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
BRPF1P55201 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRPF1P55201 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 AC006001.1-201ENST00000325130 474 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.16■□□□□ 0.66
BRPF1P55201 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 BCRP2-202ENST00000447763 634 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 BCRP6-201ENST00000510112 632 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 BCRP7-201ENST00000511549 544 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.16■□□□□ 0.66
BRPF1P55201 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.16■□□□□ 0.66
BRPF1P55201 AC106820.3-201ENST00000561653 397 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.16■□□□□ 0.66
BRPF1P55201 AC243960.2-201ENST00000600996 747 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.16■□□□□ 0.66
BRPF1P55201 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.16■□□□□ 0.66
BRPF1P55201 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
BRPF1P55201 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BRPF1P55201 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRPF1P55201 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BRPF1P55201 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.16■□□□□ 0.66
BRPF1P55201 AC140479.7-201ENST00000636301 2332 ntBASIC19.16■□□□□ 0.66
BRPF1P55201 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.15■□□□□ 0.66
BRPF1P55201 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BRPF1P55201 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRPF1P55201 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.15■□□□□ 0.66
BRPF1P55201 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms