Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AC020910.5-201ENST00000623668 1865 ntBASIC16.48■□□□□ 0.23
NCKAP1LP55160 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 HLA-V-201ENST00000429037 534 ntBASIC16.47■□□□□ 0.23
NCKAP1LP55160 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 AC131206.1-201ENST00000538078 1211 ntBASIC16.47■□□□□ 0.23
NCKAP1LP55160 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 RN7SL713P-201ENST00000582127 302 ntBASIC16.47■□□□□ 0.23
NCKAP1LP55160 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1LP55160 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1LP55160 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 AC004945.1-201ENST00000416738 983 ntBASIC16.46■□□□□ 0.23
NCKAP1LP55160 CNN2P10-201ENST00000443067 918 ntBASIC16.46■□□□□ 0.23
NCKAP1LP55160 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 COX5BP1-201ENST00000507622 393 ntBASIC16.46■□□□□ 0.23
NCKAP1LP55160 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1LP55160 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.46■□□□□ 0.23
NCKAP1LP55160 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NCKAP1LP55160 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.46■□□□□ 0.22
NCKAP1LP55160 AC009093.2-202ENST00000620513 2079 ntBASIC16.46■□□□□ 0.22
NCKAP1LP55160 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NCKAP1LP55160 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 FLJ16779-201ENST00000612722 7638 ntBASIC16.45■□□□□ 0.22
NCKAP1LP55160 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms