Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 RN7SL832P-201ENST00000607781 1756 ntBASIC13.77□□□□□ -0.21
HMGA2P52926 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGA2P52926 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HMGA2P52926 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGA2P52926 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.76□□□□□ -0.21
HMGA2P52926 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 AC027369.6-201ENST00000525520 931 ntBASIC13.76□□□□□ -0.21
HMGA2P52926 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.76□□□□□ -0.21
HMGA2P52926 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 AC015911.4-201ENST00000588022 1070 ntBASIC13.76□□□□□ -0.21
HMGA2P52926 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGA2P52926 AC012617.1-204ENST00000586340 2305 ntBASIC13.76□□□□□ -0.21
HMGA2P52926 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 PKD1P5-201ENST00000532415 10291 ntBASIC13.76□□□□□ -0.21
HMGA2P52926 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGA2P52926 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMGA2P52926 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGA2P52926 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.75□□□□□ -0.21
HMGA2P52926 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.75□□□□□ -0.21
HMGA2P52926 KRT18P13-201ENST00000400056 1290 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.75□□□□□ -0.21
HMGA2P52926 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
HMGA2P52926 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.75□□□□□ -0.21
HMGA2P52926 CNN2P11-201ENST00000429351 262 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 AC069120.2-201ENST00000524091 540 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 AC109322.1-201ENST00000524499 1264 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.75□□□□□ -0.21
HMGA2P52926 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms