Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 SERPINA13P-202ENST00000478994 924 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 HIST2H2BC-201ENST00000498492 580 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 SCARNA20.5-201ENST00000516991 142 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCN3P51790 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCN3P51790 AL606495.2-201ENST00000605867 535 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCN3P51790 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLCN3P51790 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 SALL4P5-201ENST00000419001 1760 ntBASIC16.49■□□□□ 0.23
CLCN3P51790 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
CLCN3P51790 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.49■□□□□ 0.23
CLCN3P51790 SHC1P1-201ENST00000425230 1745 ntBASIC16.49■□□□□ 0.23
CLCN3P51790 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CLCN3P51790 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 RNMTL1P1-201ENST00000454103 560 ntBASIC16.49■□□□□ 0.23
CLCN3P51790 AC021723.1-201ENST00000486306 515 ntBASIC16.49■□□□□ 0.23
CLCN3P51790 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN3P51790 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN3P51790 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN3P51790 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLCN3P51790 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLCN3P51790 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN3P51790 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.48■□□□□ 0.23
CLCN3P51790 AC138028.6-201ENST00000616106 1482 ntBASIC16.48■□□□□ 0.23
CLCN3P51790 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 ACE3P-201ENST00000423435 1973 ntBASIC16.48■□□□□ 0.23
CLCN3P51790 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLCN3P51790 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 BX284668.4-201ENST00000453917 508 ntBASIC16.48■□□□□ 0.23
CLCN3P51790 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.48■□□□□ 0.23
CLCN3P51790 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms