Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 AL137783.1-201ENST00000623494 1896 ntBASIC17.84■□□□□ 0.45
TNNI2P48788 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TNNI2P48788 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.84■□□□□ 0.45
TNNI2P48788 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.84■□□□□ 0.45
TNNI2P48788 AL353637.1-201ENST00000451571 732 ntBASIC17.84■□□□□ 0.45
TNNI2P48788 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 MIR4783-201ENST00000580343 82 ntBASIC17.84■□□□□ 0.45
TNNI2P48788 SPCS2P2-201ENST00000603270 608 ntBASIC17.84■□□□□ 0.45
TNNI2P48788 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.84■□□□□ 0.45
TNNI2P48788 AC105250.1-201ENST00000509378 2057 ntBASIC17.84■□□□□ 0.45
TNNI2P48788 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TNNI2P48788 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNNI2P48788 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNNI2P48788 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNNI2P48788 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TNNI2P48788 AC012508.2-201ENST00000567613 1472 ntBASIC17.83■□□□□ 0.45
TNNI2P48788 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
TNNI2P48788 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.83■□□□□ 0.44
TNNI2P48788 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 RN7SKP214-201ENST00000364208 315 ntBASIC17.83■□□□□ 0.44
TNNI2P48788 MIR33B-201ENST00000385104 96 ntBASIC17.83■□□□□ 0.44
TNNI2P48788 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.83■□□□□ 0.44
TNNI2P48788 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.83■□□□□ 0.44
TNNI2P48788 RPL18P13-201ENST00000478088 569 ntBASIC17.83■□□□□ 0.44
TNNI2P48788 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.83■□□□□ 0.44
TNNI2P48788 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.83■□□□□ 0.44
TNNI2P48788 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TNNI2P48788 AC008825.2-201ENST00000603374 718 ntBASIC17.83■□□□□ 0.44
TNNI2P48788 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 NAP1L6-202ENST00000641404 1222 ntBASIC17.83■□□□□ 0.44
TNNI2P48788 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.83■□□□□ 0.44
TNNI2P48788 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.83■□□□□ 0.44
TNNI2P48788 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TNNI2P48788 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNNI2P48788 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNNI2P48788 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 E2F3P2-201ENST00000447755 1422 ntBASIC17.82■□□□□ 0.44
TNNI2P48788 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNNI2P48788 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TNNI2P48788 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TNNI2P48788 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TNNI2P48788 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.82■□□□□ 0.44
TNNI2P48788 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.82■□□□□ 0.44
TNNI2P48788 AC090857.1-201ENST00000527400 390 ntBASIC17.82■□□□□ 0.44
TNNI2P48788 PRKXP1-201ENST00000561423 1122 ntBASIC17.82■□□□□ 0.44
TNNI2P48788 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TNNI2P48788 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.82■□□□□ 0.44
TNNI2P48788 AL133499.1-201ENST00000596207 608 ntBASIC17.82■□□□□ 0.44
TNNI2P48788 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TNNI2P48788 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TNNI2P48788 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TNNI2P48788 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms