Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDKN1AP38936 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDKN1AP38936 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.93□□□□□ -0.34
CDKN1AP38936 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.93□□□□□ -0.34
CDKN1AP38936 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.93□□□□□ -0.34
CDKN1AP38936 EIF3FP3-201ENST00000434851 1086 ntBASIC12.93□□□□□ -0.34
CDKN1AP38936 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 AKR7A2P1-201ENST00000460134 915 ntBASIC12.93□□□□□ -0.34
CDKN1AP38936 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 SCARNA20.5-201ENST00000516991 142 ntBASIC12.93□□□□□ -0.34
CDKN1AP38936 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 PPY2P-201ENST00000582808 702 ntBASIC12.93□□□□□ -0.34
CDKN1AP38936 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.93□□□□□ -0.34
CDKN1AP38936 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.93□□□□□ -0.34
CDKN1AP38936 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CDKN1AP38936 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDKN1AP38936 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 AC018735.1-201ENST00000437208 1502 ntBASIC12.93□□□□□ -0.34
CDKN1AP38936 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDKN1AP38936 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDKN1AP38936 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.92□□□□□ -0.34
CDKN1AP38936 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CDKN1AP38936 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CDKN1AP38936 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDKN1AP38936 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 AL645937.2-201ENST00000396808 931 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 MIR663B-201ENST00000408361 115 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 HSPB1P2-201ENST00000448722 546 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CDKN1AP38936 AC005077.2-201ENST00000449786 690 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.92□□□□□ -0.34
CDKN1AP38936 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.92□□□□□ -0.34
CDKN1AP38936 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 AC091804.1-201ENST00000486888 567 ntBASIC12.92□□□□□ -0.34
CDKN1AP38936 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.92□□□□□ -0.34
CDKN1AP38936 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDKN1AP38936 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.92□□□□□ -0.34
CDKN1AP38936 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.92□□□□□ -0.34
CDKN1AP38936 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms