Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15□□□□□ -0.01
HMGCLP35914 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 AC079776.1-201ENST00000401540 1152 ntBASIC15□□□□□ -0.01
HMGCLP35914 FAM197Y7-201ENST00000432892 766 ntBASIC15□□□□□ -0.01
HMGCLP35914 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
HMGCLP35914 RAB43P1-201ENST00000561790 589 ntBASIC15□□□□□ -0.01
HMGCLP35914 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 AC006453.4-201ENST00000636949 1252 ntBASIC15□□□□□ -0.01
HMGCLP35914 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 API5-203ENST00000455725 2257 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCLP35914 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGCLP35914 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HMGCLP35914 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AL138725.1-201ENST00000407347 1314 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 SALL4P5-201ENST00000419001 1760 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 PDIA3P1-201ENST00000471856 1510 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AC006001.1-201ENST00000325130 474 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AC112492.5-201ENST00000421897 457 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 RPL7P3-201ENST00000441388 714 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 CROCCP4-201ENST00000457096 498 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGCLP35914 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGCLP35914 AC078819.1-201ENST00000547454 765 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 AC012085.1-201ENST00000548270 765 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 ECM1P1-201ENST00000604092 1279 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 AL512343.1-201ENST00000605837 169 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 AC138696.2-201ENST00000607376 223 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms