Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC138969.3-201ENST00000546612 1459 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 AC138932.2-201ENST00000548268 1459 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 AC126755.4-201ENST00000549796 1459 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.97■□□□□ 0.15
CHRNA3P32297 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHRNA3P32297 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CHRNA3P32297 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.97■□□□□ 0.15
CHRNA3P32297 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 WASH4P-201ENST00000564273 1246 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.97■□□□□ 0.15
CHRNA3P32297 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 AC117489.1-201ENST00000625169 3217 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA3P32297 AC006504.5-208ENST00000588784 2401 ntBASIC15.97■□□□□ 0.15
CHRNA3P32297 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA3P32297 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA3P32297 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 CU639417.3-201ENST00000624240 1404 ntBASIC15.96■□□□□ 0.15
CHRNA3P32297 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 AC041040.2-201ENST00000622926 2899 ntBASIC15.96■□□□□ 0.15
CHRNA3P32297 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHRNA3P32297 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 AP006294.1-201ENST00000415407 339 ntBASIC15.96■□□□□ 0.15
CHRNA3P32297 KRT18P64-201ENST00000434946 1219 ntBASIC15.96■□□□□ 0.15
CHRNA3P32297 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA3P32297 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.96■□□□□ 0.15
CHRNA3P32297 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA3P32297 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA3P32297 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA3P32297 AL365209.1-201ENST00000624418 6473 ntBASIC15.96■□□□□ 0.15
CHRNA3P32297 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA3P32297 AC136759.1-202ENST00000530858 2194 ntBASIC15.96■□□□□ 0.14
CHRNA3P32297 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA3P32297 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
CHRNA3P32297 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA3P32297 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 CICP4-201ENST00000447359 2812 ntBASIC15.95■□□□□ 0.14
CHRNA3P32297 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA3P32297 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA3P32297 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CHRNA3P32297 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms