Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 AJ011931.1-201ENST00000618749 2492 ntBASIC14.37□□□□□ -0.11
MMP11P24347 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 ZBED1P1-201ENST00000502364 1930 ntBASIC14.37□□□□□ -0.11
MMP11P24347 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 MROH4P-201ENST00000431302 1578 ntBASIC14.36□□□□□ -0.11
MMP11P24347 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 AC006001.1-201ENST00000325130 474 ntBASIC14.36□□□□□ -0.11
MMP11P24347 RNU1-114P-201ENST00000365297 166 ntBASIC14.36□□□□□ -0.11
MMP11P24347 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 AC010328.2-201ENST00000597698 1111 ntBASIC14.36□□□□□ -0.11
MMP11P24347 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP11P24347 AC232323.1-201ENST00000540724 2099 ntBASIC14.36□□□□□ -0.11
MMP11P24347 REXO1L5P-201ENST00000622260 2098 ntBASIC14.36□□□□□ -0.11
MMP11P24347 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.36□□□□□ -0.11
MMP11P24347 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MMP11P24347 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP11P24347 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP11P24347 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MMP11P24347 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP11P24347 BRWD1P1-201ENST00000401091 371 ntBASIC14.35□□□□□ -0.11
MMP11P24347 RPL5P21-201ENST00000404620 815 ntBASIC14.35□□□□□ -0.11
MMP11P24347 MIR1908-201ENST00000410394 80 ntBASIC14.35□□□□□ -0.11
MMP11P24347 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP11P24347 DUX4L45-201ENST00000566406 1057 ntBASIC14.35□□□□□ -0.11
MMP11P24347 RN7SL219P-201ENST00000582872 296 ntBASIC14.35□□□□□ -0.11
MMP11P24347 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP11P24347 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms