Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NCK1P16333 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NCK1P16333 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NCK1P16333 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NCK1P16333 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.33□□□□□ -0.11
NCK1P16333 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.33□□□□□ -0.11
NCK1P16333 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NCK1P16333 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NCK1P16333 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NCK1P16333 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NCK1P16333 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 AL121723.1-201ENST00000445194 1519 ntBASIC14.33□□□□□ -0.12
NCK1P16333 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 MIR940-201ENST00000401276 94 ntBASIC14.33□□□□□ -0.12
NCK1P16333 MCCD1P2-201ENST00000423228 335 ntBASIC14.33□□□□□ -0.12
NCK1P16333 ACTG1P14-201ENST00000446382 1122 ntBASIC14.33□□□□□ -0.12
NCK1P16333 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 AC022145.2-201ENST00000598203 171 ntBASIC14.33□□□□□ -0.12
NCK1P16333 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.33□□□□□ -0.12
NCK1P16333 AC120114.3-201ENST00000611923 658 ntBASIC14.33□□□□□ -0.12
NCK1P16333 LINC00628-201ENST00000628516 1289 ntBASIC14.33□□□□□ -0.12
NCK1P16333 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NCK1P16333 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.33□□□□□ -0.12
NCK1P16333 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NCK1P16333 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NCK1P16333 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 CICP20-201ENST00000443330 2801 ntBASIC14.32□□□□□ -0.12
NCK1P16333 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.32□□□□□ -0.12
NCK1P16333 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 ALG1L5P-201ENST00000482043 771 ntBASIC14.32□□□□□ -0.12
NCK1P16333 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.32□□□□□ -0.12
NCK1P16333 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.32□□□□□ -0.12
NCK1P16333 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 AL079307.3-201ENST00000556114 283 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms