Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH1P12830 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH1P12830 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH1P12830 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH1P12830 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
CDH1P12830 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.77□□□□□ -0.04
CDH1P12830 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH1P12830 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH1P12830 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH1P12830 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.77□□□□□ -0.05
CDH1P12830 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH1P12830 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH1P12830 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH1P12830 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH1P12830 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 AL158070.2-201ENST00000623713 1621 ntBASIC14.77□□□□□ -0.05
CDH1P12830 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH1P12830 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH1P12830 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH1P12830 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH1P12830 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH1P12830 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CDH1P12830 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH1P12830 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH1P12830 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH1P12830 BX539320.1-201ENST00000623759 877 ntBASIC14.76□□□□□ -0.05
CDH1P12830 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CDH1P12830 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH1P12830 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.76□□□□□ -0.05
CDH1P12830 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH1P12830 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms