Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TPRP12270 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 LINC01165-201ENST00000445190 1623 ntBASIC14.08□□□□□ -0.16
TPRP12270 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TPRP12270 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TPRP12270 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 ACTG1P19-201ENST00000418987 1116 ntBASIC14.08□□□□□ -0.16
TPRP12270 KLF2P1-201ENST00000447438 1042 ntBASIC14.08□□□□□ -0.16
TPRP12270 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.08□□□□□ -0.16
TPRP12270 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.08□□□□□ -0.16
TPRP12270 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.08□□□□□ -0.16
TPRP12270 AC002044.2-201ENST00000624910 970 ntBASIC14.08□□□□□ -0.16
TPRP12270 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TPRP12270 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TPRP12270 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.08□□□□□ -0.16
TPRP12270 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TPRP12270 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TPRP12270 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TPRP12270 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.07□□□□□ -0.16
TPRP12270 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 AC244394.1-201ENST00000435000 1665 ntBASIC14.07□□□□□ -0.16
TPRP12270 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TPRP12270 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TPRP12270 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TPRP12270 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 SHC1P1-201ENST00000425230 1745 ntBASIC14.07□□□□□ -0.16
TPRP12270 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TPRP12270 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.07□□□□□ -0.16
TPRP12270 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.07□□□□□ -0.16
TPRP12270 AL450472.2-201ENST00000603663 1156 ntBASIC14.07□□□□□ -0.16
TPRP12270 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TPRP12270 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
TPRP12270 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.06□□□□□ -0.16
TPRP12270 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TPRP12270 AC067930.6-201ENST00000623257 4947 ntBASIC14.06□□□□□ -0.16
TPRP12270 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TPRP12270 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.06□□□□□ -0.16
TPRP12270 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TPRP12270 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.06□□□□□ -0.16
TPRP12270 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TPRP12270 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TPRP12270 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TPRP12270 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TPRP12270 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TPRP12270 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.06□□□□□ -0.16
TPRP12270 AC093826.1-201ENST00000508655 993 ntBASIC14.06□□□□□ -0.16
TPRP12270 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
TPRP12270 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TPRP12270 EEF1DP7-201ENST00000580496 513 ntBASIC14.06□□□□□ -0.16
TPRP12270 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms