Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.84■□□□□ 0.29
RARBP10826 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.84■□□□□ 0.29
RARBP10826 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 AP003419.4-201ENST00000616071 517 ntBASIC16.84■□□□□ 0.29
RARBP10826 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RARBP10826 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RARBP10826 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.84■□□□□ 0.29
RARBP10826 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.84■□□□□ 0.29
RARBP10826 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 AC009093.2-202ENST00000620513 2079 ntBASIC16.84■□□□□ 0.29
RARBP10826 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.84■□□□□ 0.29
RARBP10826 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARBP10826 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.83■□□□□ 0.29
RARBP10826 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RARBP10826 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.83■□□□□ 0.29
RARBP10826 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
RARBP10826 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.83■□□□□ 0.29
RARBP10826 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RARBP10826 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.83■□□□□ 0.28
RARBP10826 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 AC104784.1-201ENST00000473096 294 ntBASIC16.83■□□□□ 0.28
RARBP10826 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 AC242376.1-201ENST00000559033 726 ntBASIC16.83■□□□□ 0.28
RARBP10826 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 MIR4750-201ENST00000584564 56 ntBASIC16.83■□□□□ 0.28
RARBP10826 RN7SL555P-201ENST00000584742 339 ntBASIC16.83■□□□□ 0.28
RARBP10826 AC008805.1-201ENST00000590892 364 ntBASIC16.83■□□□□ 0.28
RARBP10826 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.83■□□□□ 0.28
RARBP10826 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 INE2-201ENST00000630399 1874 ntBASIC16.83■□□□□ 0.28
RARBP10826 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARBP10826 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.83■□□□□ 0.28
RARBP10826 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
RARBP10826 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RARBP10826 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.82■□□□□ 0.28
RARBP10826 FER1L4-210ENST00000615531 5998 ntBASIC16.82■□□□□ 0.28
RARBP10826 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.82■□□□□ 0.28
RARBP10826 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 AC012441.2-201ENST00000444843 739 ntBASIC16.82■□□□□ 0.28
RARBP10826 FGFR3P1-201ENST00000449999 601 ntBASIC16.82■□□□□ 0.28
RARBP10826 NOC2LP1-201ENST00000450578 752 ntBASIC16.82■□□□□ 0.28
RARBP10826 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.82■□□□□ 0.28
RARBP10826 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.82■□□□□ 0.28
RARBP10826 AC009779.1-201ENST00000551138 283 ntBASIC16.82■□□□□ 0.28
RARBP10826 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.82■□□□□ 0.28
RARBP10826 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.82■□□□□ 0.28
RARBP10826 COX6A1P2-201ENST00000620597 330 ntBASIC16.82■□□□□ 0.28
RARBP10826 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARBP10826 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms