Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 FAM90A2P-201ENST00000511144 1395 ntBASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 FAM90A25P-201ENST00000528404 1395 ntBASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 RPS9P1-201ENST00000419943 583 ntBASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 AC026803.1-201ENST00000569130 274 ntBASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSB-PGBD3P0DP91 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 AC105250.1-201ENST00000509378 2057 ntBASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CSB-PGBD3P0DP91 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 AC079112.1-201ENST00000454972 939 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 RN7SL258P-201ENST00000478664 300 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 AL157813.1-201ENST00000612996 587 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 AP001065.2-201ENST00000617205 644 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 CYP2T1P-202ENST00000641596 2535 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 HYMAI-201ENST00000635591 3347 ntBASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSB-PGBD3P0DP91 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 AC026320.2-201ENST00000434379 478 ntBASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSB-PGBD3P0DP91 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSB-PGBD3P0DP91 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.8■□□□□ 0.76
CSB-PGBD3P0DP91 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.8■□□□□ 0.76
CSB-PGBD3P0DP91 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms