Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IGHV4-38-2P0DP08 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.14□□□□□ -0.47
IGHV4-38-2P0DP08 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.14□□□□□ -0.47
IGHV4-38-2P0DP08 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IGHV4-38-2P0DP08 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL138725.1-201ENST00000407347 1314 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AC023090.2-201ENST00000625182 2110 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AC100827.2-201ENST00000563214 1194 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 MIR4783-201ENST00000580343 82 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL023803.2-201ENST00000620080 638 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AC022748.3-201ENST00000621828 275 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL162426.1-201ENST00000624141 743 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 SHC1P1-201ENST00000425230 1745 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 MROH4P-201ENST00000431302 1578 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 AL162727.3-201ENST00000635661 2787 ntBASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV4-38-2P0DP08 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 CYP46A4P-201ENST00000414953 267 ntBASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.12□□□□□ -0.47
IGHV4-38-2P0DP08 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms