Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
FREM3P0C091 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
FREM3P0C091 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 NUS1P3-201ENST00000423502 862 ntBASIC13.71□□□□□ -0.21
FREM3P0C091 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 AP005019.2-201ENST00000615104 511 ntBASIC13.71□□□□□ -0.21
FREM3P0C091 AC006453.4-201ENST00000636949 1252 ntBASIC13.71□□□□□ -0.21
FREM3P0C091 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FREM3P0C091 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FREM3P0C091 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 AC013726.1-201ENST00000563747 2285 ntBASIC13.71□□□□□ -0.22
FREM3P0C091 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FREM3P0C091 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
FREM3P0C091 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
FREM3P0C091 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FREM3P0C091 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
FREM3P0C091 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.7□□□□□ -0.22
FREM3P0C091 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.7□□□□□ -0.22
FREM3P0C091 AC100850.1-201ENST00000506768 649 ntBASIC13.7□□□□□ -0.22
FREM3P0C091 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.7□□□□□ -0.22
FREM3P0C091 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.7□□□□□ -0.22
FREM3P0C091 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
FREM3P0C091 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 AC079178.1-201ENST00000420915 656 ntBASIC13.7□□□□□ -0.22
FREM3P0C091 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 PPY2P-201ENST00000582808 702 ntBASIC13.7□□□□□ -0.22
FREM3P0C091 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FREM3P0C091 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
FREM3P0C091 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
FREM3P0C091 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 AL354877.1-201ENST00000424412 413 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms