Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPNS1P04632 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.08■□□□□ 0
CAPNS1P04632 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.08■□□□□ 0
CAPNS1P04632 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CAPNS1P04632 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPNS1P04632 KRT8P37-201ENST00000451609 1420 ntBASIC15.08■□□□□ 0
CAPNS1P04632 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPNS1P04632 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CAPNS1P04632 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CAPNS1P04632 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.07■□□□□ 0
CAPNS1P04632 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.07■□□□□ 0
CAPNS1P04632 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 Z93015.1-201ENST00000451718 390 ntBASIC15.07■□□□□ 0
CAPNS1P04632 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 AC023310.1-201ENST00000554836 735 ntBASIC15.07■□□□□ 0
CAPNS1P04632 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.07■□□□□ 0
CAPNS1P04632 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.07■□□□□ 0
CAPNS1P04632 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 AC063926.3-201ENST00000624734 5658 ntBASIC15.07■□□□□ 0
CAPNS1P04632 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 BEND3P1-201ENST00000421591 1944 ntBASIC15.07■□□□□ 0
CAPNS1P04632 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
CAPNS1P04632 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.07■□□□□ 0
CAPNS1P04632 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPNS1P04632 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.07■□□□□ 0
CAPNS1P04632 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.06■□□□□ 0
CAPNS1P04632 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 AC006504.5-208ENST00000588784 2401 ntBASIC15.06■□□□□ 0
CAPNS1P04632 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.06■□□□□ 0
CAPNS1P04632 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.06■□□□□ 0
CAPNS1P04632 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.06■□□□□ 0
CAPNS1P04632 AC006001.1-201ENST00000325130 474 ntBASIC15.06■□□□□ 0
CAPNS1P04632 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.06■□□□□ 0
CAPNS1P04632 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 RPL17P11-201ENST00000417593 544 ntBASIC15.06■□□□□ 0
CAPNS1P04632 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 AC134915.1-201ENST00000426461 574 ntBASIC15.06■□□□□ 0
CAPNS1P04632 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.06■□□□□ 0
CAPNS1P04632 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.06■□□□□ 0
CAPNS1P04632 AC093433.1-201ENST00000458048 571 ntBASIC15.06■□□□□ 0
CAPNS1P04632 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.06■□□□□ 0
CAPNS1P04632 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.06■□□□□ 0
CAPNS1P04632 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.06■□□□□ 0
CAPNS1P04632 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CAPNS1P04632 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.06■□□□□ 0
CAPNS1P04632 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.06■□□□□ 0
CAPNS1P04632 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.06■□□□□ 0
CAPNS1P04632 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.06■□□□□ 0
CAPNS1P04632 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms