Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC9.08□□□□□ -0.96
APOBP04114 DPY19L2P5-201ENST00000456300 331 ntBASIC9.08□□□□□ -0.96
APOBP04114 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC9.08□□□□□ -0.96
APOBP04114 OR2A1-AS1-210ENST00000496968 531 ntBASIC9.08□□□□□ -0.96
APOBP04114 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 AC006372.4-201ENST00000624122 1543 ntBASIC9.08□□□□□ -0.96
APOBP04114 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC9.08□□□□□ -0.96
APOBP04114 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 RN7SL173P-201ENST00000461853 292 ntBASIC9.08□□□□□ -0.96
APOBP04114 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 AC010531.8-201ENST00000623341 685 ntBASIC9.08□□□□□ -0.96
APOBP04114 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.08□□□□□ -0.96
APOBP04114 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 GUSBP10-201ENST00000417412 665 ntBASIC9.07□□□□□ -0.96
APOBP04114 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC9.07□□□□□ -0.96
APOBP04114 RN7SL147P-201ENST00000487345 298 ntBASIC9.07□□□□□ -0.96
APOBP04114 CISD2-202ENST00000503643 808 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 RPS23-207ENST00000511844 530 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 AC138761.6-201ENST00000583997 1423 ntBASIC9.07□□□□□ -0.96
APOBP04114 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
APOBP04114 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
APOBP04114 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 AC023906.1-201ENST00000486386 453 ntBASIC9.07□□□□□ -0.96
APOBP04114 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 AC091769.1-201ENST00000619576 568 ntBASIC9.07□□□□□ -0.96
APOBP04114 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 RN7SL288P-201ENST00000490496 291 ntBASIC9.07□□□□□ -0.96
APOBP04114 RN7SL375P-201ENST00000492442 298 ntBASIC9.07□□□□□ -0.96
APOBP04114 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 AC139712.1-201ENST00000378256 1875 ntBASIC9.07□□□□□ -0.96
APOBP04114 ACE-203ENST00000413513 2237 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms