Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 AC092337.1-201ENST00000568699 1129 ntBASIC13.47□□□□□ -0.25
APOC1P02654 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 AP001160.2-201ENST00000596071 487 ntBASIC13.47□□□□□ -0.25
APOC1P02654 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.47□□□□□ -0.25
APOC1P02654 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 AC100757.3-201ENST00000622361 1406 ntBASIC13.47□□□□□ -0.25
APOC1P02654 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
APOC1P02654 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.46□□□□□ -0.25
APOC1P02654 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.46□□□□□ -0.25
APOC1P02654 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.46□□□□□ -0.25
APOC1P02654 AC114501.2-201ENST00000439631 535 ntBASIC13.46□□□□□ -0.25
APOC1P02654 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.46□□□□□ -0.25
APOC1P02654 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.46□□□□□ -0.25
APOC1P02654 AC004066.1-201ENST00000502488 802 ntBASIC13.46□□□□□ -0.25
APOC1P02654 AC097493.3-201ENST00000509725 367 ntBASIC13.46□□□□□ -0.25
APOC1P02654 IGHV3-42-201ENST00000520410 361 ntBASIC13.46□□□□□ -0.25
APOC1P02654 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.46□□□□□ -0.25
APOC1P02654 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.46□□□□□ -0.25
APOC1P02654 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
APOC1P02654 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOC1P02654 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
APOC1P02654 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
APOC1P02654 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
APOC1P02654 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOC1P02654 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOC1P02654 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOC1P02654 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.46□□□□□ -0.26
APOC1P02654 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.46□□□□□ -0.26
APOC1P02654 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
APOC1P02654 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOC1P02654 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.46□□□□□ -0.26
APOC1P02654 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.45□□□□□ -0.26
APOC1P02654 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.45□□□□□ -0.26
APOC1P02654 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
APOC1P02654 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.45□□□□□ -0.26
APOC1P02654 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
APOC1P02654 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.45□□□□□ -0.26
APOC1P02654 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.45□□□□□ -0.26
APOC1P02654 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOC1P02654 FGD5P1-202ENST00000614866 2498 ntBASIC13.45□□□□□ -0.26
APOC1P02654 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms