Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 ST20-AS1-201ENST00000560255 4223 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 AC005912.2-201ENST00000619492 2400 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
KRT6AP02538 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
KRT6AP02538 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 AL645937.2-201ENST00000396808 931 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 RPL13AP25-201ENST00000484130 612 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 SPDYE18-201ENST00000510091 1050 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.71□□□□□ -0.05
KRT6AP02538 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.71□□□□□ -0.05
KRT6AP02538 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
KRT6AP02538 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 AC004840.1-201ENST00000636359 365 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT6AP02538 DRD5P1-201ENST00000456605 1438 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT6AP02538 AC026748.1-201ENST00000624349 3251 ntBASIC14.71□□□□□ -0.05
KRT6AP02538 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
KRT6AP02538 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
KRT6AP02538 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.71□□□□□ -0.06
KRT6AP02538 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT6AP02538 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 MTHFR-210ENST00000641407 2387 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 AC093525.8-201ENST00000624099 1342 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
KRT6AP02538 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 MEP1AP4-201ENST00000423244 1087 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.7□□□□□ -0.06
KRT6AP02538 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.7□□□□□ -0.06
KRT6AP02538 AL353779.1-201ENST00000434793 351 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.7□□□□□ -0.06
KRT6AP02538 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.7□□□□□ -0.06
KRT6AP02538 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.7□□□□□ -0.06
KRT6AP02538 TPRX2P-201ENST00000535362 881 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
KRT6AP02538 AC093512.1-201ENST00000617969 520 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 AL138799.1-201ENST00000448213 1675 ntBASIC14.7□□□□□ -0.06
KRT6AP02538 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT6AP02538 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
KRT6AP02538 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
KRT6AP02538 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT6AP02538 AC005252.3-201ENST00000623855 2258 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms