Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HLA-DRAP01903 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DRAP01903 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DRAP01903 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 RN7SL48P-201ENST00000579283 293 ntBASIC16.22■□□□□ 0.19
HLA-DRAP01903 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 MTHFR-210ENST00000641407 2387 ntBASIC16.22■□□□□ 0.19
HLA-DRAP01903 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRAP01903 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRAP01903 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 C2orf27AP3-201ENST00000434123 579 ntBASIC16.21■□□□□ 0.19
HLA-DRAP01903 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 AL590640.2-201ENST00000457038 527 ntBASIC16.21■□□□□ 0.19
HLA-DRAP01903 CROCCP4-201ENST00000457096 498 ntBASIC16.21■□□□□ 0.19
HLA-DRAP01903 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 AL354718.3-201ENST00000616414 581 ntBASIC16.21■□□□□ 0.19
HLA-DRAP01903 CR382287.1-201ENST00000623954 586 ntBASIC16.21■□□□□ 0.19
HLA-DRAP01903 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRAP01903 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRAP01903 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
HLA-DRAP01903 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.21■□□□□ 0.18
HLA-DRAP01903 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
HLA-DRAP01903 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-DRAP01903 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRAP01903 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRAP01903 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRAP01903 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRAP01903 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CLUHP2-201ENST00000426660 1303 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms