Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 AL360270.3-201ENST00000609118 1348 ntBASIC16.57■□□□□ 0.24
CD4P01730 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 NOC2LP1-201ENST00000450578 752 ntBASIC16.57■□□□□ 0.24
CD4P01730 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.57■□□□□ 0.24
CD4P01730 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 NPM1P43-201ENST00000558669 786 ntBASIC16.57■□□□□ 0.24
CD4P01730 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.57■□□□□ 0.24
CD4P01730 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.57■□□□□ 0.24
CD4P01730 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 AC007950.2-201ENST00000615045 2347 ntBASIC16.56■□□□□ 0.24
CD4P01730 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD4P01730 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CD4P01730 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD4P01730 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CD4P01730 AC073150.1-201ENST00000450406 1084 ntBASIC16.56■□□□□ 0.24
CD4P01730 RN7SL181P-201ENST00000462921 277 ntBASIC16.56■□□□□ 0.24
CD4P01730 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 RCC2P8-201ENST00000502779 1035 ntBASIC16.56■□□□□ 0.24
CD4P01730 IGLV3-15-201ENST00000518356 244 ntBASIC16.56■□□□□ 0.24
CD4P01730 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.56■□□□□ 0.24
CD4P01730 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 NAP1L6-202ENST00000641404 1222 ntBASIC16.56■□□□□ 0.24
CD4P01730 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD4P01730 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
CD4P01730 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
CD4P01730 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CD4P01730 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.56■□□□□ 0.24
CD4P01730 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD4P01730 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CD4P01730 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD4P01730 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD4P01730 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 AL157414.3-201ENST00000624276 1954 ntBASIC16.55■□□□□ 0.24
CD4P01730 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CD4P01730 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD4P01730 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.55■□□□□ 0.24
CD4P01730 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CD4P01730 AL355334.1-201ENST00000417713 215 ntBASIC16.55■□□□□ 0.24
CD4P01730 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms