Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.71□□□□□ -0.21
PPP1R3DO95685 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PPP1R3DO95685 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.71□□□□□ -0.21
PPP1R3DO95685 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PPP1R3DO95685 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.71□□□□□ -0.22
PPP1R3DO95685 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PPP1R3DO95685 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PPP1R3DO95685 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PPP1R3DO95685 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
PPP1R3DO95685 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.71□□□□□ -0.22
PPP1R3DO95685 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC027601.5-201ENST00000624065 2482 ntBASIC13.7□□□□□ -0.22
PPP1R3DO95685 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 MIR943-201ENST00000401286 94 ntBASIC13.7□□□□□ -0.22
PPP1R3DO95685 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AL589987.1-201ENST00000453380 819 ntBASIC13.7□□□□□ -0.22
PPP1R3DO95685 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 MEIS3P1-201ENST00000495167 958 ntBASIC13.7□□□□□ -0.22
PPP1R3DO95685 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PPP1R3DO95685 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PPP1R3DO95685 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 CLK3P2-201ENST00000427566 1453 ntBASIC13.69□□□□□ -0.22
PPP1R3DO95685 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms